R packages by test

igraph - Network Analysis and Visualization

Routines for simple graphs and network analysis. It can handle large graphs very well and provides functions for generating random and regular graphs, graph visualization, centrality methods and much more.

Last updated 1 months ago

complex-networksgraph-algorithmsgraph-theorymathematicsnetwork-analysisnetwork-graph

21.01 score 554 stars 1.9k packages 30k scripts 497k downloads

later - Utilities for Scheduling Functions to Execute Later with Event Loops

Executes arbitrary R or C functions some time after the current time, after the R execution stack has emptied. The functions are scheduled in an event loop.

Last updated 12 months ago

15.42 score 138 stars 2.5k packages 233 scripts 616k downloads

duckdb - DBI Package for the DuckDB Database Management System

The DuckDB project is an embedded analytical data management system with support for the Structured Query Language (SQL). This package includes all of DuckDB and an R Database Interface (DBI) connector.

Last updated 28 days ago

databaseduckdbolap

13.29 score 131 stars 46 packages 1.3k scripts 23k downloads

cmdstanr - R Interface to 'CmdStan'

A lightweight interface to 'Stan' <https://mc-stan.org>. The 'CmdStanR' interface is an alternative to 'RStan' that calls the command line interface for compilation and running algorithms instead of interfacing with C++ via 'Rcpp'. This has many benefits including always being compatible with the latest version of Stan, fewer installation errors, fewer unexpected crashes in RStudio, and a more permissive license.

Last updated 6 months ago

bayesbayesianmarkov-chain-monte-carlomaximum-likelihoodmcmcstanvariational-inference

12.31 score 143 stars 6 packages 5.1k scripts

polars - Lightning-Fast 'DataFrame' Library

Lightning-fast 'DataFrame' library written in 'Rust'. Convert R data to 'Polars' data and vice versa. Perform fast, lazy, larger-than-memory and optimized data queries. 'Polars' is interoperable with the package 'arrow', as both are based on the 'Apache Arrow' Columnar Format.

Last updated 8 days ago

arrowpolarsrust

11.99 score 478 stars 2 packages 1.1k scripts 10 downloads

mirai - Minimalist Async Evaluation Framework for R

Designed for simplicity, a 'mirai' evaluates an R expression asynchronously in a parallel process, locally or distributed over the network, with the result automatically available upon completion. Modern networking and concurrency built on 'nanonext' and 'NNG' (Nanomsg Next Gen) ensure reliable and efficient scheduling, over fast inter-process communications or TCP/IP secured by TLS. Advantages include being inherently queued thus handling many more tasks than available processes, no storage on the file system, support for otherwise non-exportable reference objects, an event-driven promises implementation, and built-in asynchronous parallel map.

Last updated 12 days ago

asynchronous-tasksconcurrencydistributed-computinghigh-performance-computingparallel-programmingpromises

11.44 score 193 stars 7 packages 103 scripts 3.8k downloads

crew - A Distributed Worker Launcher Framework

In computationally demanding analysis projects, statisticians and data scientists asynchronously deploy long-running tasks to distributed systems, ranging from traditional clusters to cloud services. The 'NNG'-powered 'mirai' R package by Gao (2023) <doi:10.5281/zenodo.7912722> is a sleek and sophisticated scheduler that efficiently processes these intense workloads. The 'crew' package extends 'mirai' with a unifying interface for third-party worker launchers. Inspiration also comes from packages. 'future' by Bengtsson (2021) <doi:10.32614/RJ-2021-048>, 'rrq' by FitzJohn and Ashton (2023) <https://github.com/mrc-ide/rrq>, 'clustermq' by Schubert (2019) <doi:10.1093/bioinformatics/btz284>), and 'batchtools' by Lang, Bischel, and Surmann (2017) <doi:10.21105/joss.00135>.

Last updated 12 days ago

high-performance-computing

11.06 score 128 stars 2 packages 162 scripts 2.4k downloads

adbcdrivermanager - 'Arrow' Database Connectivity ('ADBC') Driver Manager

Provides a developer-facing interface to 'Arrow' Database Connectivity ('ADBC') for the purposes of driver development, driver testing, and building high-level database interfaces for users. 'ADBC' <https://arrow.apache.org/adbc/> is an API standard for database access libraries that uses 'Arrow' for result sets and query parameters.

Last updated 19 days ago

10.97 score 383 stars 3 packages 71 scripts 3.0k downloads

httpgd - A 'HTTP' Server Graphics Device

A graphics device for R that is accessible via network protocols. This package was created to make it easier to embed live R graphics in integrated development environments and other applications. The included 'HTML/JavaScript' client (plot viewer) aims to provide a better overall user experience when dealing with R graphics. The device asynchronously serves graphics via 'HTTP' and 'WebSockets'.

Last updated 6 months ago

10.94 score 390 stars 1 packages 228 scripts 3.7k downloads

nanonext - NNG (Nanomsg Next Gen) Lightweight Messaging Library

R binding for NNG (Nanomsg Next Gen), a successor to ZeroMQ. NNG is a socket library implementing 'Scalability Protocols', a reliable, high-performance standard for common communications patterns including publish/subscribe, request/reply and service discovery, over in-process, IPC, TCP, WebSocket and secure TLS transports. As its own threaded concurrency framework, provides a toolkit for asynchronous programming and distributed computing, with intuitive 'aio' objects which resolve automatically upon completion of asynchronous operations, and synchronisation primitives allowing R to wait upon events signalled by concurrent threads.

Last updated 13 days ago

concurrencyhttpsipc-messagemessaging-librarynanomsgnngrpcsocket-communicationsynchronization-primitivestcp-protocolwebsocket

9.89 score 59 stars 9 packages 25 scripts 7.6k downloads

secretbase - Cryptographic Hash, Extendable-Output and Base64 Functions

Fast and memory-efficient streaming hash functions and base64 encoding / decoding. Hashes strings and raw vectors directly. Stream hashes files potentially larger than memory, as well as in-memory objects through R's serialization mechanism. Implementations include the SHA-256, SHA-3 and 'Keccak' cryptographic hash functions, SHAKE256 extendable-output function (XOF), and 'SipHash' pseudo-random function.

Last updated 2 months ago

base64cryptographic-hash-functionsextendable-output-functionskeccaksha256sha3shake256siphash

7.88 score 9 stars 19 packages 7 scripts 11k downloads

ichimoku - Visualization and Tools for Ichimoku Kinko Hyo Strategies

An implementation of 'Ichimoku Kinko Hyo', also commonly known as 'cloud charts'. Static and interactive visualizations with tools for creating, backtesting and development of quantitative 'ichimoku' strategies. As described in Sasaki (1996, ISBN:4925152009), the technique is a refinement on candlestick charting, originating from Japan and now in widespread use in technical analysis worldwide. Translating as 'one-glance equilibrium chart', it allows the price action and market structure of financial securities to be determined 'at-a-glance'. Incorporates an interface with the OANDA fxTrade API <https://developer.oanda.com/> for retrieving historical and live streaming price data for major currencies, metals, commodities, government bonds and stock indices.

Last updated 3 months ago

ichimokuichimoku-cloudoandaquantitative-finance

7.74 score 32 stars 36 scripts 1.4k downloads

adbcflightsql - 'Arrow' Database Connectivity ('ADBC') 'FlightSQL' Driver

Provides a developer-facing interface to the 'Arrow' Database Connectivity ('ADBC') 'FlightSQL' driver for the purposes of building high-level database interfaces for users. 'ADBC' <https://arrow.apache.org/adbc/> is an API standard for database access libraries that uses 'Arrow' for result sets and query parameters.

Last updated 19 days ago

golang

7.70 score 385 stars 2 scripts

tidypolars - Get the Power of Polars with the Syntax of the Tidyverse

Polars is an amazing cross-language tool for manipulating very large data. However, one drawback is that the R implementation has a syntax that will look odd to many R users who are not used to Python syntax. The objective of tidypolars is to improve the ease-of-use of Polars in R by providing tidyverse syntax to polars.

Last updated 7 days ago

7.52 score 179 stars 31 scripts

stantargets - Targets for Stan Workflows

Bayesian data analysis usually incurs long runtimes and cumbersome custom code. A pipeline toolkit tailored to Bayesian statisticians, the 'stantargets' R package leverages 'targets' and 'cmdstanr' to ease these burdens. 'stantargets' makes it super easy to set up scalable Stan pipelines that automatically parallelize the computation and skip expensive steps when the results are already up to date. Minimal custom code is required, and there is no need to manually configure branching, so usage is much easier than 'targets' alone. 'stantargets' can access all of 'cmdstanr''s major algorithms (MCMC, variational Bayes, and optimization) and it supports both single-fit workflows and multi-rep simulation studies. For the statistical methodology, please refer to 'Stan' documentation (Stan Development Team 2020) <https://mc-stan.org/>.

Last updated 8 months ago

bayesianhigh-performance-computingmaker-targetopiareproducibilitystanstatisticstargets

6.85 score 48 stars 185 scripts

string2path - Rendering Font into 'data.frame'

Extract glyph information from font data, and translate the outline curves to flattened paths or tessellated polygons. The converted data is returned as a 'data.frame' in easy-to-plot format.

Last updated 3 months ago

rustcargo

5.77 score 98 stars 12 scripts 351 downloads

SBC - Simulation Based Calibration for rstan/cmdstanr models

SBC helps perform Simulation Based Calibration on Bayesian models. SBC lets you check for bugs in your model code and/or algorithm that fits the model. SBC focuses on models built with 'Stan' <https://mc-stan.org>, but can support other modelling languages as well.

Last updated 9 months ago

diagnosticssimulation-based-inference

5.46 score 54 stars 72 scripts

audio.whisper - Transcribe Audio Files using the "Whisper" Automatic Speech Recognition Model

The "Whisper" models are trained for speech recognition and translation tasks, capable of transcribing speech audio into the text in the language it is spoken (Automatic Speech Recognition) as well as translated into English (speech translation). The package is an "Rcpp" wrapper around the standalone C++ implementation provided at <https://github.com/ggerganov/whisper.cpp>. There are 10 pretrained models available of different sizes and language capabilities. "Whisper" is explained in the paper: 'Robust Speech Recognition via Large-Scale Weak Supervision' by Radford et al. (2022), available at <arXiv:2212.04356>.

Last updated 7 months ago

5.40 score 116 stars 24 scripts

zstdlite - Fast Compression and Serialization with 'Zstandard' Algorithm

Fast, compressed serialization of R objects using the 'Zstandard' algorithm. R objects can be compressed and decompressed quickly using the standard serialization mechanism in R. Raw byte vectors and strings are also handled directly for compatibility with compressed data created by other systems and programs supporting 'Zstandard' compression. Dictionaries are supported for more effective compression of small data, and functions are provided for training these dictionaries. This implementation is a wrapper around the 'Zstandard' 'C' library which is available from <https://github.com/facebook/zstd>.

Last updated 9 months ago

zstd

4.75 score 28 stars 7 scripts

glaredb - R Bindings for 'GlareDB'

R bindings for 'GlareDB', an analytical database based on 'Apache Arrow' and 'Apache DataFusion' that can connect to various data sources and execute queries.